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HomeMy WebLinkAboutBIO-1011 Bergen Community College Division of Mathematics, Science, and Technology Department of Biology and Horticulture General Biology I (BIO-101) General Course Syllabus Course Title: General Biology I (BIO-101) Course Description: This is the first course in a two-semester sequence in general biology. The course introduces the fundamental principles of biology and their relationships to society. Lecture topics include: an introduction to science, basic chemistry, cell biology, metabolism, genetics, and a survey of the Prokaryotae, Protists, and Fungi. Laboratory exercises develop a proficiency in the use of laboratory equipment and guide students in investigations of biochemistry, cell biology and metabolism, genetics, microbiology, protists, and fungi. Prerequisites: None General Education Course: Yes Course Credits: 4.0 Hours per week: 6.0: 3 hours lecture and 3 hours lab Course Coordinator: Robert Highley Required Lecture Textbook: Mason, K. A., T. Duncan, G. Johnson, J. B. Losos, and S. R. Singer. 2018. Understanding Biology, 2nd Ed. New York, NY: McGraw-Hill Education, Inc. (M) Required Laboratory Manual: Highley, R. 2007. Exercises in Laboratory Biology I, 3rd Ed. (ELB) Revised 2017 Summer 2 Student Learning Objectives- Students will be able to: 1. describe the nature of science as it specifically applies to the discipline of biology. Students will use the scientific m ethod of inquir y. They will be evaluated by lecture and laboratory exam inations. 2. explain the process of evolution and the im pact that Charles Darwin and other evolutionists had on the explanation of the process. Students will be evaluated b y lecture exam inations. 3. dem onstrate the knowledge of the chem ical basis of living organisms and how chem istry defines a large part of the stud y of biolog y. Students will be evaluated b y lecture exam inations. 4. define the characteristics of water, the m edium on which all life on earth depends. Students will be evaluated by lecture examinations . 5. be fam iliar with the nature of organic biocom pounds (carbohydrates, proteins etc…) and their im portance as building blocks of living s ystem s. Students will be evaluated b y lecture exam inations. 6. identif y the chem ical and physical structure and diversity of living organism s and how the y interact with the environm ent. Students will be evaluated by lecture exam inations. 7. list the characteristics of living organisms. Students will be evaluated b y lecture exam inations and student projects. 8. explain the com position and function of biological m em branes. Students will be evaluated b y lecture and laborator y exam inations. 9. define passive transport- diffusion, osm osis, and facilitated diffusion and relate the changing conditions inside and outside of cells to these definitions. Students will be evaluated by lecture and laborator y exam inations. 10. define active transport and relate the changing conditions inside and outside of cells to the need for AT. Students will be evaluated b y lecture exam inations. 11. explain the natur e of free energ y and the application of free energ y to living systems, m ainly in the m etabolism of cells. Students will be evaluated b y lecture exam inations. 12. explain and describe the nature of enzym es and their critical im portance to living system s. Students will be evaluated by lecture and laborator y exam inations. 13. follow the cell’s m etabolic pathwa ys and their energetic products in both phototrophic and chem otrophic organism s. Students will be evaluated by lecture exam inations. 14. explain the need for cellular reproduction and the different t ypes carried out by selected organisms. Students will be evaluated b y lecture and laborator y exam inations. 15. explain the natur e of informational m olecules (DNA and RNA) and the expression of this inform ation through the process of gene expression. Students will be evaluated by lecture and lab exam inations. 16. com pare Mendelian and non-m endelian inheritance and describe the wa y living organisms pass characteristics from one generation to the next. Students will be evaluated b y lecture exam inations and student papers. 3 17. understand the im portance of the light m icroscope to the practice of biology. Students will be evaluated in the laborator y regarding the proper use of the m icroscope during a laboratory practical. Students’ laboratory participation m ay also be evaluated in the form of a student laborator y project. 18. properl y use the m icroscope to exam ine the difference between selected prokaryotic and euk ar yotic organisms. Students will be evaluated by laborator y observation and laborator y exam s. 19. m ak e a wet-m ount of selected biological m aterial and properly use the m icroscope to view the m aterial. Students will be evaluated by laborator y observation and laborator y exams. 20. understand the im portance of recording laborator y data in the form of a notebook or a laborator y report. Student notebook s or laborator y reports will be evaluated by their instructors as part of their final grade. 21. construct two different types of graphs (histogram and Cartesian), in various lab exercises, using a comm ercial graphing program . They review each graph for general trends that appear upon the analysis of the biological data. Students will be evaluated b y lab exam inations and or lab reports. 22. work as a m em ber of a laborator y group and learn how to collect data or inform ation as part of this group. Students will be evaluated during the laboratory period and the participation will be recorded as a com ponent of their final grade. The evaluation m ay be in the form of a laborat ory presentation in addition to the class participation. Student Assessment Tools: T he above student learning objectives will be generall y assessed or evaluated by instructors using a variet y of assessment instruments including lecture exams, laboratory exams, quizzes, laboratory reports, written reports, presentations, projects, etc. The decisions concerning the t ype or types and num ber of instrum ents that are used in a specific section of the course will be left to the instructor of that section. This inform ation, when given b y the instructor should be recorded b y the student in the Student Assessment Section of this docum ent. Course Content Lecture Topics: Chapter Title Text: K. Mason et al. Understanding Biology (M) page Part I T he Molecular Basis of Life 1 T he Science of Biology (M ): p. 1 The Diversit y of Life is Overwhelm ing Biology is the Science of Life Science is Based on Both Observation and Reason The Stud y of Evolution is a Good Exam ple of Scientific Inquiry A Few Im portant Ideas form the Core of Biology 4 2 The Nature of Molecules and the Properties of water (M ):p. 21 All Matter is Com posed of Atoms The Elem ents in Living System s Have Low Atom ic Masses Molecules are Collections of Atoms held together by Chem ical Bonds The Properties of W ater Result from Its Polar Nature W ater Molecules Can Dissociate into Ions 3 T he Chem ical Building Blocks of Life (M ): p. 40 Carbon Provides the Framework of Biological Molecules Carboh ydrates Form both Structural and Energ y-Storing Molecules Proteins are the Tools of the Cell Nucleic Acids Store and Ex press Genetic Inform ation Hydrophobic Lipids Form Fats and Mem branes 4 Cell Structure (M ): p. 66 All Living Organism s are Com posed of Cells Prokaryotic Cells lack Interior Organization Eukaryotic Cells are Highly Com partmentalized Mem branes Organize the Cell Interior Functional Com partm ents Mitochondria and Chloroplasts are Energy Processing Organelles An Internal Skeleton Supports the Shape of Cells Extracellular Structures Protect Cells Cell to Cell Connections Determ ine How Adjacent Cells Interact 5 Mem branes (M ): p. 94 Mem branes are Phospholipid Bila yers with Em bedded Proteins Phospholipids Provide a Mem brane’s Structural Foundation Mem brane Proteins Enable a Broad Range of Interactions with the Environm ent Passive Transport m oves Molecules across Mem branes by Diffusion Active Transport Across Membranes Requires Energy Bulk y Materials Cross Membranes within Vesicles 6 Energ y and Metabolism (M ): p. 115 Energ y Flows through Living S ystem s The Laws of Therm odynamics Govern All Energy Changes AT P is the Energ y Currency of Cells Enzym es Speed Chem ical Reactions by Lowering Activation Energ y Metabolism is the Sum of a Cell’s Chem ical Activities 7 How Cells Harvest Energ y (M ): p. 131 Cells Harvest Energ y from Organic Com pounds b y Oxidation Glycolysis Splits Glucose and Yields a Sm all Am ount of ATP The Krebs Cycle is the Oxidative Core of Cellular Respiration Electrons Harvested b y Oxidation Pass along an Electron Transport Chain The Total Energ y Yield Energy Yield of Aerobic Respiration far Exceeds that of Glycolysis 5 Aerobic Respiration is Regulated by Feedback Inhibition Som e forms of Energy Metabolism Do Not require O2 Carboh ydrates are not the only Energ y Source Used by Heterotrophs 8 Photos ynthesis (M ): p. 156 Photos ynthesis Uses Sunlight to Power the Synthesis of Organic Molecules Experim ents Revealed that Photos ynthesis is a Chem ical Process Pigm ents Capture Energy from Sunlight Photos ynthetic Pigm ents are Organized into Photos ystems Energ y from Sunlight is used to Produce a Proton Gradient Using ATP and NADPH from the Light Reactions, CO2 is incorporated into Organic Molecules Photorespiration Short-Circuits Photosynthesis 10 How Cells Divide (M ): p. 198 Bacterial Cell Division is Clonal Eukaryotes have Large Linear Chrom osom es The Euk aryotic Cell C ycle is Com plex and Highly Organized During Interphase, Cells Grow and Prepare for Mitosis In Mitosis, Chrom osom e Segregate Events of the Cell C ycle are Carefully Regulated Cancer is a Failure of Cell-Cycle Control 11 Sexual Reproduction and Meiosis (M ): p. 222 Sexual Reproduction Requires Meiosis Meiosis features Two Divisions with One Round of DNA Replication The Process of Meiosis Involves Intim ate Interactions Between Hom ologues Meiosis has Four Distinct Features Genetic Variation is the Evolutionary Consequence of Sex 12 Patterns of Inheritance (M ): p. 238 Experim ents Carried Out by Mendel Explain Heredit y Mendel’s Principle of Segregation Accounts for 3:1 Phenot ypic Ratios Mendel’s Principle of Independent Assortm ent Asserts that Genes Segregate Independentl y Probabilit y Allows us to Predict the Results of Crosses Genot ype Dictates Phenot ype b y Specif ying Protein Sequences Extending Mendel’s Model Provides a Clearer View of Genetics in Action 14 DNA: T he Genetic Material (M ): p. 280 DNA is theGenetic Material The DNA Molecule is a Double Helix Both Strands are copied during DNA Replication Prokaryotes Organize the Enzym es used to Duplicate DNA Eukaryotic Chrom osom es are Large and Linear Cells Repair Dam aged DNA 6 15 Genes and How They W ork (M ): p. 304 Experim ents Have Revealed the Nature of Genes The Genetic Code Relates Inform ation in DNA and Protein Prokaryotes Exhibit all the Basic Features of Transcription Eukaryotes use Three Polym erases, and Extensively Modif y Transcripts Eukaryotic Genes May Contain Noncoding Sequences The Ribosom e is the Machine of Protein S ynthesis The Process of Translation is Com plex and Energy Expensive Mutations are Alterations in the Sequence, Num ber, or Position of Genes 16 Control of Gene Expression (Overview) (M ): p. 332 17 Biotechnolog y (Optional) (M ): p. 358 18 Genom ics (Optional) (M ): p. 383 22 System atics and Phylogeny (M ): p. 475 System atics Reconstructs Evolutionar y Relationships Cladistics Focuses on Traits Derived from a Comm on ancestor Classification is a Labeling Process, Not an Evolutionary Reconstruction Taxonom y attem pts to Classif y Organism s in an Evo lutionary Context The Largest Taxa are Domains 23 Prok ar yotes and Viruses (M ): p. 497 Prokaryotes are the Most Ancient Organisms Prokaryotes Have an Organized but Sim ple Structure The Genetics of Prok aryotes Focuses on DNA Transfer Prokar yotic Metabolism is Quite Diverse Bacteria Cause Im portant Hum an Diseases Viruses are not Organism s Bacterial Viruses Infect by DNA Injection Anim al Viruses Infect by Endoc ytosis 24 Protists (M ): p. 522 Protists, the First Eukaryotes, Arose by Endos ym biosis Overview of Protists The General Biolog y and Ecolog y of the Protists 25 Fungi (M ): p. 548 Fungi Have Unique Reproductive and Nutritional Strategies Fungi have an Enorm ous Ecological Im pact Fungi are Im portant Plant and Anim al Pathogens Fungi are Taxonom ically Diverse The General Biolog y and Ecolog y of the Fungi 7 Laboratory Schedule: Week Number Title Text: Exercises in Laboratory Biology I (ELB) Page 1. Scientific Investigation (Exercise 1) (ELB): p. 1 Questions Within Exercise (WE) 2. Scientific M easurement (2) Read: Unit Expression Factors (ELB): p. 11 Appendix A, p. 193 Read: Rules for Identif ying Significant Figures Appendix B, p. 195 Questions WE and p. 15 3. Qualitative Tests for Biological M olecules (3) Carboh ydrates, Proteins, Lipids, and Nucleic Acids (ELB): p. 19 Questions WE Qualitative Analysis of Two Unknown Substances (4) (ELB): p. 33 Questions p. 34 4. Light M icroscopy (5) (ELB): p. 37 Sim ple Microscopes Com pound Light Microscopes Using A Com pound Microscope Dissecting Microscopes Questions WE 5. Cells (6) (ELB): p. 51 Prokaryotic Cells Eukaryotic Cells Protists, Plant Cells, and Anim al Cells Questions WE 6. M embranes (ELB) Read: Biological Mixtures Appendix C, p. 197 Diffusion through a Sim ulated Sem i-perm eable Mem brane (7) p. 61 Tonicity of Red Blood Cells (8) p. 67 Plasm olysis in Plant Cells (9) p. 71 The Effects of Organic Substances on Cell Mem branes (10) p. 73 Questions pp. 65, 69, 70, 72, and 76 7. Enzymes (12) The Effects of Tem perature The Effects of pH (ELB): p. 83 Questions WE 8 8. Energ y Generating Pathways Mitochondrion and Chloroplast Structure (11) Oxygen Uptake during Aerobic Respiration (13) Ferm entation (14) (ELB) p. 79 p. 95 p. 103 Questions pp. 80, 98, 101, 105, and 106 9. Photosynthesis (ELB) Separation of Plant Pigm ents (15) A Qualitative Absorption Spectrum of Chlorophyll (16) Carbon Dioxide Incorporation during Photos ynthesis (17) p. 107 p. 111 p. 115 10. Questions Mitotic Cell Division in Plants and Animals (18) pp. 108, 112, and 117 (ELB): p. 119 The Onion Root Tip Plant Cell Division Anim al Cell Division Questions p. 123 11. Meiotic Cell Division in a Flow ering Plant (19) (ELB): p. 125 The Flower Meiotic Cell Division Questions p. 129 12. Viruses and Bacteria (ELB) Viruses (20) p. 131 Oil Imm ersion Microscop y (22) p. 141 Bacterial Morpholog y (23) p. 145 The Gram Stain (24) Questions p. 149 pp. 133, 139, 142, 146, and 154 13. T he Algae (25) (ELB): p. 155 Introduction to the Algae Euglenophyta, Dinoph yta, Rhodoph yta, Bacillariophyta, Chlorophyta, and Phaeoph yta Questions WE 14. T he Protozoa (26) (ELB): p. 169 Introduction to the Protozoa Rhizopoda, Granuloreticulosa (Foram s) Actinopoda, Kinetoplastida, Apicom plexa, Ciliophora, Myxom ycota, Zoom astigota, and Archeoprotista Questions WE 9 15. T he Fungi (27) (E LB): p. 183 Introduction to the Fungi Zygom ycota, Ascom ycota, Basidom ycota, and Deuterom ycota The Lichens Questions WE Student Assessment: Lecture Exam inations % Laboratory Com ponent % Student Project/R eport % Class Participation % Other % Total 100% If you have a medical con dition or develop a medical condition during this semester, which prevents you from fulfilling the req uirements of t his course, you must notify your physician. You and your physician must decide whether or not it is appropriate for you to remain in this course. If the decision is to remain in this course, please obtain a letter from your physician indicating that your continued participation in this course is appropriate and present it to the Department Chair. Faculty Addenda: As per individual faculty member Lecture Attendance: As per instructor; Lab Attendance: As per instructor; Policy Concerning Late Assignments: As per instructor; Policy Concerning M ake-Up Testing: As per instructor; Safety Information: As per instructor and assigned exercise. 10 College Policies: T hese policies can be found in the Bergen Community College Sm art Catalog. Student Responsibility Students will be held responsible for reading all pertinent inform ation in college publications regarding withdrawals, course drops, college deadlines, and tuition refunds. Students are responsible for com pliance with the rules and regulations as stated in college publications. Absence of Instructor Students are expected to wait twenty m inutes for a facult y m em ber to com e to class. If at the end of twent y m inutes, the facult y m em ber does not com e, the students should sign an attendance sheet, which indicates the course, date, and tim e. A student should deliver the attendance sheet to the divisional office (A304) if between 9:00 a.m . and 5:00 p.m . or to the Evening Office (C107) if before 9:00 a.m . or after 5:00 p.m . Students cannot be penalized by faculty for not waiting longer than twenty m inutes. Academic Dishonesty and Plagiarism Bergen Comm unity College is committed to academ ic integrity – the honest, fair and continuing pursuit of knowledge, free from fraud or deception. Students are responsible for their own work. Faculty and academ ic support services staff will take appropriate m easures to discourage academ ic dishonest y. Plagiarism is a form of academ ic dishonesty and m ay be a violation of U.S. Copyright laws. Plagiaris m is defined as the act of taking som eone else’s words, opinions, or ideas and claim ing them as one’s own. Consequences of Violations Academic Integrity A. Instructor’s Sanctions for a Violation T he faculty m ember will determ ine the course of action to be followed. This m ay include: • Assigning a failing grade on the assignm ent; • Assigning a lower final course grade; • Failing the student in the course • Other penalties appropriate to the violation; In all cases, the instructor s hall notif y the Vice President of Student Services of the violation and the penalt y im posed. T he student has the right to appeal the decision of the instructor to the appropriate departm ent head. B. Institutional Sanctions for Violations W hen a violation of academic integrity has been reported regarding a student, the Vice President of Student Services m ay im pose disciplinary penalties beyond those im posed b y the course instructor, which m ay include suspension or dism issal from the College. The student shall have the right to a hearing before the Vice President of Student Services or a designated judicial affairs committee. Judicial procedures governing violations of academ ic integrity are contained in the student handbook. Class Attendance All students are expected to attend punctuall y every scheduled m eeting of each course in which the y are registered. Attendance and lateness policies and sanctions are to be determ ined by the instructor for each section of each course. T hese will be established in writing on the individual co urse outline. Attendance will be k ept by the instructor for adm inistrative and counseling purposes. Eating and Drinking Eating or drink ing in classrooms, lecture room s, laboratories, g ym nasium , swimming pool, or passagewa ys is forbidden. Covered beverages only are perm itted in the library. Eating and drinking are perm itted in cafeteria and vending areas onl y. 11 Learning Assistance Henry and Edith Cerullo L earning Assistance Center The Tutoring Center, English Language Resource Center, Math W alk -In Center and W riting Center are collectivel y known as the Henry and Edith Cerullo Learning Assistance Center. The Cerullo Learning Assistance Center is located in the Pitk in Education Building, in Room L -125. The telephone num ber is (201) 447-7489. The Learning Assistance Center, staffed with peer and professional tutors, offers free individual and group tutoring, supplem ental instruction, and online tutoring for subjects offered at the College. T he Center provides alternative approaches to problem solving and organizational skills. Tutors help clarif y classroom lectures and textbooks and help students prepare for exams. These services build student self-confidence and reduce fear of failure. The Center is equipped with the latest technology and software, including tapes, books, review sheets, exercises and software. Services for Students w ith Disabilities The Office of Specialized Services/ Deaf Services, located in L-115 in the Pitkin Education Center provides accomm odations and auxiliar y services to students with disabilities attending Bergen Comm unity College. Students are encouraged to subm it docum entation to OSS during the early stages of the adm ission process. The suggested deadlines for subm itting docum entation are as follows: August 1st for fall sem esters, Decem ber 1st for spring sem esters. For more inform ation please contact our office at 201 -612- 5270 or at www.bergen.edu/oss. Sidney Silverman Librar y Main Building, Pitkin Education Center, L-wing, 2nd Floor. Param us Library Hours: (201) 447-7131 or visit http://www.bergen.edu/librar y/calendar/gcal.htm Param us Service Desk: (201) 447-7970 Meadowlands Location: 1280 W all Street, L yndhurst 2nd Floor Meadowlands Librar y Hours: http://www.bergen.edu/library/calendar/gcal.htm Meadowlands Service Desk: (201) 301-9692 www.bergen.edu/library Testing Services The Bergen Comm unity College Office of Testing Services (OTS) is located in Room S -127. OTS serves the college comm unity by identif ying, developing, procuring, adm inistering, processing, and/or evaluating exam inations, which m eet a variety of adm inistrative and instructional needs. To contact the OTS, please call (201) 447-7203. The Office of Testing Services adm inisters m akeup tests as a service for students who, for com pelling and exceptional reasons, have m issed a scheduled classroom exam ination. Students m ust receive prior perm ission from and mak e arrangem ents with their course instructors to take these exam inations, under specific conditions, in the Office of Testing Services, Room S-127. WebAdvisor W ebAdvisor is a web interface that allows students to access inform ation contained in Datatel’s Colleague, the adm inistrative database used b y Bergen Comm unity College. Students m ay use W ebAdvisor to register for classes, to pay tuition and fees, to view their class schedules, to check grades, to check on progress toward degree requirem ents, etc. W ebAdvisor accounts are available for all students enrolled in credit program s. New students are strongl y encouraged to attend an in-person registration or advisem ent session before using a W ebAdvisor account. Eligible students without W ebAdvisor user names and passwords m ay access their W ebAdvisor account by going to go.bergen.edu and selecting “I’m new to W ebAdvisor.” T hen, follow the on-screen directions. Check the W ebAdvisor FAQ for answers to comm on questions, such as how to reset your password. Students m ust have a valid e-m ail address on file with the College to use W ebAdvisor 5/25